YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GRXC8_ARATH
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYKTETRGS LSYNNNSKVM NNMNVFPSET LAKIESMAAE NAVVIFSVST CCMCHAIKRL  60
   61 FRGMGVSPAV HELDLLPYGV EIHRALLRLL GCSSGGATSP GALPVVFIGG KMVGAMERVM 120
  121 ASHINGSLVP LLKDAGALWL

Type	Start	End	Confidence
Cytoplasmic	1	41	0.54
Transmembrane Helix	42	57	0.40
Non-Cytoplasmic	58	140	0.52