YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	STEP2_ARATH
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMATRAIRY QLPSPRFRAP RCESSEPIKQ IQIQQRPRGG DLAENGKIVL QPRLCTLRSY  60
   61 GSDMVIAKKD GGDGGGGGSD VELASPFFET LTDYIESSKK SQDFETISGR LAMIVFAVTV 120
  121 TEEIVTGNSL FKKLDVEGLS EAIGAGLAAM GCAAMFAWLT ISRNRVGRIF TVSCNSFIDS 180
  181 LVDQIVDGLF YDTKPSDWSD DL

Type	Start	End	Confidence
Cytoplasmic	1	106	0.84
Transmembrane Helix	107	126	0.68
Non-Cytoplasmic	127	141	0.70
Transmembrane Helix	142	161	0.93
Cytoplasmic	162	202	0.83