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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y5815_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.92
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSLWGSLL FFSFFVKHLT SLDPNTDAYH LSSFFSAMRL PNSPQAHTFS SLCSWPGVVV  60
   61 CDSSENVLHI SASGLDLSGS IPDNTIGKMS KLQTLDLSGN KITSLPSDLW SLSLLESLNL 120
  121 SSNRISEPLP SNIGNFMSLH TLDLSFNSIS GKIPAAISNL VNLTTLKLHN NDFQFGVPPE 180
  181 LVHCRSLLSI DLSSNRLNES LPVGFGSAFP LLKSLNLSRN LFQGSLIGVL HENVETVDLS 240
  241 ENRFDGHILQ LIPGHKHNWS SLIHLDLSDN SFVGHIFNGL SSAHKLGHLN LACNRFRAQE 300
  301 FPEIGKLSAL HYLNLSRTNL TNIIPREISR LSHLKVLDLS SNNLTGHVPM LSVKNIEVLD 360
  361 LSLNKLDGDI PRPLLEKLAM MQRFNFSFNN LTFCNPNFSQ ETIQRSFINI RNNCPFAAKP 420
  421 IITKGKKVNK KNTGLKIGLG LAISMAFLLI GLLLILVALR VRRKSRTWAT KLAINNTEPN 480
  481 SPDQHDSTTD IKQATQIPVV MIDKPLMKMT LADLKAATFN FDRGTMLWEG KSGPTYGAVL 540
  541 PGGFRAALKV IPSGTTLTDT EVSIAFERLA RINHPNLFPL CGYCIATEQR IAIYEDLDMV 600
  601 NLQSLLHNNG DDSAPWRLRH KIALGTARAL AFLHHGCIPP MVHGEVKAAT ILLDSSQEPR 660
  661 LADFGLVKLL DEQFPGSESL DGYTPPEQER NASPTLESDV YSFGVVLLEL VSGKKPEGDL 720
  721 VNWVRGLVRQ GQGLRAIDPT MQETVPEDEI AEAVKIGYLC TADLPWKRPT MQQVVGLLKD 780
  781 ISPNY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle