YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CML47_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDSSLLSPI SLLTIVIFLF ILNLMMIIQD FSSSFPFRFH LFFSNAYILF TSIRNNKQNT  60
   61 ELPIIKKVVV PNRADIKTSV EEVKAIIDDS EALYECLIEE GEEYLLEKNE MMGKEIVKEA 120
  121 FRLFDENQDG FIDENELKHV LSLLGYDECT KMECRKMVKV YDENRDGKID FYEFVKLIEK 180
  181 SFS

Type	Start	End	Confidence
Cytoplasmic	1	8	0.76
Transmembrane Helix	9	28	0.95
Non-Cytoplasmic	29	183	0.72