YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CP26A_ARATH
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANPKVFFDL TVDGKPAGRI VIELFADLTP RTAENFRGLC TGERGIGKCG KPIHYKGSTF  60
   61 DHIVPDLMWC GGDIIFENEP IHSEELDDEY FILNHEDGPG IISMADSNGS QFQIHMKDYG 120
  121 LQVDGDHVVI GKVVEGLDLM RNIEKEVITT TTRTPSKPVV IADCGELSDY RSERCYLMKN 180
  181 IEKEVIIKTA KDNKPVVIAD CGGLSDDRSE RYYLINIVVA CMVLMCFWSW FV

Type	Start	End	Confidence
Cytoplasmic	1	211	0.84
Transmembrane Helix	212	231	0.95
Non-Cytoplasmic	232	232	0.86