YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GLIP2_ARATH
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENSRSTLII FFAYTTIILI GSINCRDNNN NNLVTNQSAL FVFGDSVFDA GNNNYIDTLP  60
   61 SFRSNYWPYG QTTFKFPTGR VSDGRTIPDF IAEYAWLPLI PAYLQPSNGK NQFPYGVSFA 120
  121 SAGAGALVGT FPGMVINLKS QLNNFKKVEK LLRSTLGEAQ GKMVISRAVY LFHIGVNDYQ 180
  181 YPFSTNSSIF QSSPQEIYVD FVVGNTTAVI KEVYKIGGRK FGFLNMGAYD CAPASLIIDQ 240
  241 TKIGTCFKPV TELINLHNEK LESGLRRLER ELSGFKYALH DYHTSLSVRM NNPSKYGFKE 300
  301 GKMACCGTGP LRGINTCGGR MGVSQSYELC EKVTDYLFFD HFHLTEKAHQ QIAELIWSGP 360
  361 TNVTKPYNLQ ALFELN

Type	Start	End	Confidence
Cytoplasmic	1	6	0.55
Transmembrane Helix	7	25	0.45
Non-Cytoplasmic	26	376	0.71