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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB5G_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKQGCEIEA LDIDYNIFVR KINVNPFGIF RRKPRPEADQ PVKTEEESLK LEDETGNKVK  60
   61 HVLKGVTCRA KPWEILAIVG PSGAGKSSLL EILAARLIPQ TGSVYVNKRP VDRANFKKIS 120
  121 GYVTQKDTLF PLLTVEETLL FSAKLRLKLP ADELRSRVKS LVHELGLEAV ATARVGDDSV 180
  181 RGISGGERRR VSIGVEVIHD PKVLILDEPT SGLDSTSALL IIDMLKHMAE TRGRTIILTI 240
  241 HQPGFRIVKQ FNSVLLLANG STLKQGSVDQ LGVYLRSNGL HPPLHENIVE FAIESIESIT 300
  301 KQQRLQESRR AAHVLTPQTT LQEKRSEDSQ GESKSGKFTL QQLFQQTRVA DVGTMNIATE 360
  361 FTRDFANSRL EETMILTHRF SKNIFRTKEL FACRTVQMLG SGIVLGLIFH NLKDDLKGAR 420
  421 ERVGLFAFIL TFLLTSTIEA LPIFLQEREI LMKETSSGSY RVSSYAVANG LVYLPFLLIL 480
  481 AILFSTPVYW LVGLNPSFMA FLHFSLLIWL ILYTANSVVV CFSALVPNFI VGNSVISGVM 540
  541 GSFFLFSGYF ISNHEIPGYW IFMHYISLFK YPFEGFLINE FSKSNKCLEY GFGKCLVTEE 600
  601 DLLKEERYGE ESRWRNVVIM LCFVLLYRFI SYVILRCRCS QRSFKTTLA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle