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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME22_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGITTALLLV MLMSVHTSSY ETTILKPYKE DNFRSLVAKA CQFIDAHELC VSNIWTHVKE  60
   61 SGHGLNPHSV LRAAVKEAHD KAKLAMERIP TVMMLSIRSR EQVAIEDCKE LVGFSVTELA 120
  121 WSMLEMNKLH GGGGIDLDDG SHDAAAAGGN LKTWLSAAMS NQDTCLEGFE GTERKYEELI 180
  181 KGSLRQVTQL VSNVLDMYTQ LNALPFKASR NESVIASPEW LTETDESLMM RHDPSVMHPN 240
  241 TVVAIDGKGK YRTINEAINE APNHSTKRYV IYVKKGVYKE NIDLKKKKTN IMLVGDGIGQ 300
  301 TIITGDRNFM QGLTTFRTAT VAVSGRGFIA KDITFRNTAG PQNRQAVALR VDSDQSAFYR 360
  361 CSVEGYQDTL YAHSLRQFYR DCEIYGTIDF IFGNGAAVLQ NCKIYTRVPL PLQKVTITAQ 420
  421 GRKSPNQNTG FVIQNSYVLA TQPTYLGRPW KLYSRTVYMN TYMSQLVQPR GWLEWFGNFA 480
  481 LDTLWYGEYN NIGPGWRSSG RVKWPGYHIM DKRTALSFTV GSFIDGRRWL PATGVTFTAG 540
  541 LAN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle