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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3540195, gi|7...
Protein type: Globular with Signal Peptide
Type Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCVNFSSLKL VLFLMMLVAM FTLYCSPPLQ IPEDPSSFAN KWILEPAVTT DPRYIATSEI  60
   61 NWNSMSLVVE HYLSGRSEYQ GIGFLNLNDN EINRWQVVIK SHCQHIALHL DHAASNITWK 120
  121 SLYPEWIDEE EKFKVPTCPS LPWIQVPDKS RIDLIIAKLP CNKSGKWSRD VARLHLQLAA 180
  181 ARVAASSEGL HDVHVILVSD CFPIPNLFTG QELVARQGNI WLYKPKLHQL RQKLQLPVGS 240
  241 CELSVPLQAK DNFYSANAKK EAYATILHSD DAFVCGAIAV AQSIRMSGST RNLVILVDDS 300
  301 ISEYHRSGLE SAGWKIHTFQ RIRNPKAEAN AYNQWNYSKF RLWELTEYNK IIFIDADMLI 360
  361 LRNMDFLFEY PEISTTGNDG TLFNSGLMVI EPSNSTFQLL MDHINDINSY NGGDQGYLNE 420
  421 IFTWWHRIPK HMNFLKHFWE GDTPKHRKSK TRLFGADPPI LYVLHYLGYN KPWVCFRDYD 480
  481 CNWNVVGYHQ FASDEAHKTW WRVHDAMPKK LQRFCLLSSK QKAQLEWDRR QAEKANYRDG 540
  541 HWRIKIKDKR LTTCFEDFCF WESMLWHWGD YEILETDPGL TETMIPSSSP MESRHRLSFS 600
  601 NEKTSRRRFQ RIEKGVKFNT LKLVLICIML GALFTIYRFR YPPLQIPEIP TSFGLTTDPR 660
  661 YVATAEINWN HMSNLVEKHV FGRSEYQGIG LINLNDNEID RFKEVTKSDC DHVALHLDYA 720
  721 AKNITWESLY PEWIDEVEEF EVPTCPSLPL IQIPGKPRID LVIAKLPCDK SGKWSRDVAR 780
  781 LHLQLAAARV AASSKGLHNV HVILVSDCFP IPNLFTGQEL VARQGNIWLY KPNLHQLRQK 840
  841 LQLPVGSCEL SVPLQAKDNF YSAGAKKEAY ATILHSAQFY VCGAIAAAQS IRMSGSTRDL 900
  901 VILVDETISE YHKSGLVAAG WKIQMFQRIR NPNAVPNAYN EWNYSKFRLW QLTEYSKIIF 960
  961 IDADMLILRN IDFLFEFPEI SATGNNATLF NSGLMVVEPS NSTFQLLMDN INEVVSYNGG1020
 1021 DQGYLNEIFT WWHRIPKHMN FLKHFWEGDE PEIKKMKTSL FGADPPILYV LHYLGYNKPW1080
 1081 LCFRDYDCNW NVDIFQEFAS DEAHKTWWRV HDAMPENLHK FCLLRSKQKA QLEWDRRQAE1140
 1141 KGNYKDGHWK IKIKDKRLKT CFEDFCFWES MLWHWGETNS TNNSSTTTTS SPPHKTALPS1200
 1201 L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle