YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|10177862
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRSPMVPMA VLVYVSLLFS VSYSSTFVIT NNCPFTIWPG TLAGSGTQPL PTTGFRLDVG  60
   61 QSVRIPTALG WSGRIWARTG CNFDANGAGK CMTGDCGGKL ECAGNGAAPP TSLFEITLGH 120
  121 GSDDKDFYDV SLVDGYNLPI VALPTGGGLV GACNATGCVA DINISCPKEL QVMGEEEAER 180
  181 GGVVACKSAC EAFGLDQYCC SGQFANPTTC RPSLYSSIFK RACPRAYSYA FDDGTSTFTC 240
  241 KASEYAIIFC PGRYI

Type	Start	End	Confidence
Signal Peptide	1	24	0.84
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	255	0.96