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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GGLO6_ARATH
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFTSSPSYG SLNAAFWRTI FVVHCISTLV FTTISTPPED PVKCVSGNTN CTVTNSYGAF  60
   61 PDRSTCRAAN VAYPTTEAEL ISVVAAATKA GRKMRVTTRY SHSITKLACT DGTDGLLIST 120
  121 KFLNHTVRTD ATAMTLTVES GVTLRQLIAE AAKVGLALPY APYWWGLTVG GMMGTGAHGS 180
  181 SLWGKGSAVH DYVTEIRIVS PGSVNDGFAK VRVLRETTTP KEFNAAKVSL GVLGVISQVT 240
  241 LKLQPMFKRS LRYVMRNDSD FGDQAVTFGM KHEFADFIWL PSQGKVVYRM DDRVAVNTSG 300
  301 NGLLDFMPFR SQLSAALAII RSSEETQERF RDANGKCAGA TLITSTLFAT SYGLTNNGMI 360
  361 FTGYPVIGSQ NRMMSSGSCL DSLHDGLITA CPWDSRIKSE FFHQTTFSIP LTQVKSFIND 420
  421 IKSLVKIESK SLCVLELYDG ILMRYVTSSP AYLGKETEAL DFDLTYYRAK DPLSPRLYED 480
  481 FIEEIEQIAL FKYNALPHWG KNRNLAFDGV IKKYKNVPAF LKVKESYDPM GLFSSEWTDQ 540
  541 ILGIKGNVTI IKDGCALEGL CVCSEDAHCA PTKGYFCRPG KVYKEARVCT RADDISVIQS 600
  601 LSY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle