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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6633825
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCWAFRVMD ISCGHMPSYH LSILYLISLS TFTFTTLCHY FNYLMSVLVS LSRYSGILDH  60
   61 HRTNRHHMFL SIDSCFEVKK DITVCAGYAW SSVAKKKEED STATKFHHFS QQCMLNAINK 120
  121 FMQLPSVFLS LFINLISLSH AFCLCNITTI HTYNLHTYTS STRLKLHSMG FSRSLNRTVG 180
  181 VFVFFILDIV DFLLCFTYKT LDFFFESEWK PCYCCPPPEA KPISAGGNRG GKMIVSERSG 240
  241 DYSKVVSLTR TKIYLDEISD TLYSRPSLLT KLTKLVKCFK KDVVKCCDES KKRSPSTKKT 300
  301 LLTVNSTVVE KLQRTPRWSD CHCTFCTSWL SSSNQSLFVN VQQPTDNKAQ ENVVFIHGFL 360
  361 SSSTFWTETL FPNFSDSAKS NYRFLAVDLL GYGKSPKPND SLYTLKEHLE MIERSVISQF 420
  421 RLKTFHLVAH SLGCILALAL AVKHPGAIKS LTLLAPPYYS VPKGVQGTQY VMRRLAPKEV 480
  481 WPPMAFGASV ASWYEHISRT VSLVLCKNHH LLEFLTRLLT RNRMRTYLIE GFLCHTHNAS 540
  541 WHTLHNIIFG SGSKVEAYLD HVRDNVDCEV AVFHGGRDEL IPVECSYGVK RKVPRARIHV 600
  601 VPDKDHITIV VGRQKEFARE LELIWRRSTT PQLHSIN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle