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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CLPB3_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATATTTATA AFSGVVSVGT ETRRIYSFSH LQPSAAFPAK PSSFKSLKLK QSARLTRRLD  60
   61 HRPFVVRCEA SSSNGRLTQQ EFTEMAWQSI VSSPDVAKEN KQQIVETEHL MKALLEQKNG 120
  121 LARRIFSKIG VDNTKVLEAT EKFIQRQPKV YGDAAGSMLG RDLEALFQRA RQFKKDLKDS 180
  181 YVSVEHLVLA FADDKRFGKQ LFKDFQISER SLKSAIESIR GKQSVIDQDP EGKYEALEKY 240
  241 GKDLTAMARE GKLDPVIGRD DEIRRCIQIL SRRTKNNPVL IGEPGVGKTA ISEGLAQRIV 300
  301 QGDVPQALMN RKLISLDMGA LIAGAKYRGE FEDRLKAVLK EVTDSEGQII LFIDEIHTVV 360
  361 GAGATNGAMD AGNLLKPMLG RGELRCIGAT TLDEYRKYIE KDPALERRFQ QVYVDQPTVE 420
  421 DTISILRGLR ERYELHHGVR ISDSALVEAA ILSDRYISGR FLPDKAIDLV DEAAAKLKME 480
  481 ITSKPTALDE LDRSVIKLEM ERLSLTNDTD KASRERLNRI ETELVLLKEK QAELTEQWEH 540
  541 ERSVMSRLQS IKEEIDRVNL EIQQAEREYD LNRAAELKYG SLNSLQRQLN EAEKELNEYL 600
  601 SSGKSMFREE VLGSDIAEIV SKWTGIPVSK LQQSERDKLL HLEEELHKRV VGQNPAVTAV 660
  661 AEAIQRSRAG LSDPGRPIAS FMFMGPTGVG KTELAKALAS YMFNTEEALV RIDMSEYMEK 720
  721 HAVSRLIGAP PGYVGYEEGG QLTETVRRRP YSVILFDEIE KAHGDVFNVF LQILDDGRVT 780
  781 DSQGRTVSFT NTVIIMTSNV GSQFILNNTD DDANELSYET IKERVMNAAR SIFRPEFMNR 840
  841 VDEYIVFKPL DREQINRIVR LQLARVQKRI ADRKMKINIT DAAVDLLGSL GYDPNYGARP 900
  901 VKRVIQQNIE NELAKGILRG DFKEEDGILI DTEVTAFSNG QLPQQKLTFK KIESETADAE 960
  961 QEEAAFSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle