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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y1639_ARATH
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKLPQRNCA DKQEYTVHMR KMGMVIFACL LLLIIFPTFG YADINTSSPL SIGQTLSSPD  60
   61 GVYELGFFSP NNSRKQYVGI WFKNIAPQVV VWVANRDKPV TKTAANLTIS SNGSLILLDG 120
  121 TQDVIWSTGE AFTSNKCHAE LLDTGNLVVI DDVSGKTLWK SFENLGNTML PQSSVMYDIP 180
  181 RGKNRVLTSW RSNSDPSPGE FTLEFTPQVP PQGLIRRGSS PYWRSGPWAK TRFSGIPGID 240
  241 ASYVSPFTVL QDVAKGTASF SYSMLRNYKL SYVTLTSEGK MKILWNDGKS WKLHFEAPTS 300
  301 SCDLYRACGP FGLCVRSRNP KCICLKGFVP KSDDEWKKGN WTSGCVRRTQ LSCHTNSSTK 360
  361 TQGKETDSFY HMTRVKTPDL YQLAGFLNAE QCYQDCLGNC SCTAFAYISG IGCLVWNREL 420
  421 VDTVQFLSDG ESLSLRLASS ELAGSNRTKI ILGTTVSLSI FVILVFAAYK SWRYRTKQNE 480
  481 PNPMFIHSSQ DAWAKDMEPQ DVSGVNLFDM HTIRTATNNF SSSNKLGQGG FGPVYKGKLV 540
  541 DGKEIAVKRL SSSSGQGTDE FMNEIRLISK LQHKNLVRLL GCCIKGEEKL LIYEYLVNKS 600
  601 LDVFLFDSTL KFEIDWQKRF NIIQGVARGL LYLHRDSRLR VIHRDLKVSN ILLDEKMIPK 660
  661 ISDFGLARMS QGTQYQDNTR RVVGTLGYMA PEYAWTGVFS EKSDIYSFGV LLLEIIIGEK 720
  721 ISRFSEEGKT LLAYAWESWC ETKGVDLLDQ ALADSSHPAE VGRCVQIGLL CVQHQPADRP 780
  781 NTLELMSMLT TISELPSPKQ PTFTVHSRDD DSTSNDLITV NEITQSVIQG R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle