YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|8671766
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFKRCTRVF KRFSKNLQED PLKSIKIFVT KKNLVGIFFL AGKKFGGNIF LAEKKIFGAK  60
   61 KSAGKIILAP KIGGKNKFWR QKIGGKNSVS NYMFLLDEGL APKLFFFFFF LFPAFLLAVY 120
  121 LVDFHLRDRF KLEYSAENET MIERSVLIHR AVLSSVERLF AILLEQYKGK FPFWLSPRQA 180
  181 IVCSVSEDYR SYADKVRDQI HEAGYYVDVD TTDRNVSDKV QEAQVAHYNY ILVVGDEEAR 240
  241 TGQVTVWLRD EMMSIETLSD EFKLKTANFL

Type	Start	End	Confidence
Cytoplasmic	1	103	0.60
Transmembrane Helix	104	124	0.91
Non-Cytoplasmic	125	270	0.58