YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GSXL9_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTFTSEASR SRSKKVCVIG AGPAGLVSAR ELRKEGHKVV VLEQNEDVGG QWFYQPNVEE  60
   61 EDPLGRSSGS INGELKVHSS IYSSLRLTSP REIMGYSDFP FLAKKGRDMR RFPGHKELWL 120
  121 YLKDFSEAFG LREMIRFNVR VEFVGEKEEE DDVKKWIVRS REKFSGKVME EIFDAVVVAT 180
  181 GHYSHPRLPS IKGMDSWKRK QIHSHVYRVP DPFRNEVVVV VGNSMSGQDI SMELVEVAKE 240
  241 VHLSAKTLDI SSGLSKVISK HPNLLIHPQI ESLEDDGKVI FVDGSWVVAD TILYCTGYSY 300
  301 KFPFLESKGR IEVDDDRVGP LFEHTFPPCL SPSLSFVGIP RKLIGFPFFE AQAKWIAQVL 360
  361 SGKSSLPSPD QMLQSVDEFY RSRDLAGVPK HNTHDIADFT YCDKYADYVG FPHLEDWRKL 420
  421 LCLSALNNSQ ENLETYRDSW DDHELLQEAL QSSHFTNFNS

Type	Start	End	Confidence
Signal Peptide	1	29	0.85
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	460	0.99