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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12322537, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.85
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGICEMKSCC SWLLLISLLC SLSNESQAIS PDGEALLSFR NAVTRSDSFI HQWRPEDPDP  60
   61 CNWNGVTCDA KTKRVITLNL TYHKIMGPLP PDIGKLDHLR LLMLHNNALY GAIPTALGNC 120
  121 TALEEIHLQS NYFTGPIPAE MGDLPGLQKL DMSSNTLSGP IPASLGQLKK LSNFNVSNNF 180
  181 LVGQIPSDGV LSGFSKNSFI GNLNLCGKHV DVVCQDDSGN PSSHSQSGQN QKKNSGKLLI 240
  241 SASATVGALL LVALMCFWGC FLYKKLGKVE IKSLAKDVGG GASIVMFHGD LPYSSKDIIK 300
  301 KLEMLNEEHI IGCGGFGTVY KLAMDDGKVF ALKRILKLNE GFDRFFEREL EILGSIKHRY 360
  361 LVNLRGYCNS PTSKLLLYDY LPGGSLDEAL HERGEQLDWD SRVNIIIGAA KGLSYLHHDC 420
  421 SPRIIHRDIK SSNILLDGNL EARVSDFGLA KLLEDEESHI TTIVAGTFGY LAPEYMQSGR 480
  481 ATEKTDVYSF GVLVLEVLSG KRPTDASFIE KGLNVVGWLK FLISEKRPRD IVDPNCEGMQ 540
  541 MESLDALLSI ATQCVSPSPE ERPTMHRVVQ LLESEVMTPC PSEFYDSSSD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle