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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LTN1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKPKGDAAR SKARPSSSSL AASLLPSGSA AAVGFGGYVG SSRFQTSLSN EDSASFLDLD  60
   61 SEVAQHLQRL SRKDPTTKIK ALASLSELVK QKQGKELLPI IPQWTFEYKK LILDYSRDVR 120
  121 RATHDVMTNV VTGAGRDIAP HLKSIMGPWW FSQFDLASEV SQAAKSSFQV GSSFGNSVFL 180
  181 VEAAFPAQEK RLHALNLCSA EIFAYLEENL KLTPQNLSDK SLASDELEEM YQQMISSSLV 240
  241 GLATLLDILL REPDNTGSAN INSESKLASK ARAVATSSAE KMFSSHKCFL NFLKSESPSI 300
  301 RSATYSLLSS FIKNVPEVFG EGDVRSLAPA LLGVFRENNP TCHSSMWEAV LLFSKKFPQS 360
  361 WVYLNVHKSV LNHLWQFLRN GCYGSPQVSY PALILFLEVM PAQSVESDKF FVNFFKNLLA 420
  421 GRSMCESSST DQLSLLRATT ECFLWGLRNA SRYCDVPNSI HDLQVDLIDK VLVKILWADF 480
  481 TELSKGSIPP NQRKSAENLG MGNSVSYLQE LGRCILEILS GINLLEQNLL SFFCKAVQES 540
  541 FLNMLQQGDL EIVAGSMRKM IDFLLLLERY SVLEGESWPL HQFMGPLLSK AFPWIRSSEL 600
  601 LDGVKLLSVS VSVFGPRKVV PVLIDDIETS TLLSVEKEKN MSPEKLIKVF QEIFIPWCMD 660
  661 GYDSSTAARQ DLLFSLLDDE CFTQQWSDVI SYVFNQQHQG FNNLAAMKML LEKARDEITK 720
  721 RSSGQELNQR IGSRPEHWHH TLIESTAISL VHSSSATTTS AVQFLCSVLG GSTQDSSISF 780
  781 VSRSSLVLIY RGILEKLLSF IKQSPLCSVN DTCSSLIVEA IAFDSSSSVD VIVVAKFAAE 840
  841 VIDGSFFSLK SLSQDATLLT TVLSSIFIID LENRMTSLVD NTLSESKEKR KDRNFVCDYV 900
  901 HAVCSKMDNQ FWKSINYDVR KSSASTLAQF LRSVVLLEDD LQPFELTLLC ASRMTEVLEY 960
  961 LSLDQSDEEN ICGLLLLESD AWPIWVSPSS SASIDTHGMP VQLCELRKSK SQRYVSFIDS1020
 1021 LIMKLGIHRF IVGHKDHGFA SQAWLSVEIL CTWEWPGGKV QTSFLPNLVS FCKDEPSSGG1080
 1081 LLNSIFDILL NGALVHVKDE EEGLGNMWVD FNNNIVDVVE PFLRALVSFL HILFKEDLWG1140
 1141 EEEAMAAFKM ITDKLFIGEE TSKNCLRIIP YIMSIIISPL RTKVKSGGSG KDTLLPLEVL1200
 1201 LRNWLERSLS FPPLVLWQSG EDIQDWFQLV ISCYPVSDKA EEAKELQRHL STEERTLLLD1260
 1261 LFRKQKQDPG ASTVVTQLPA VQILLARLIM IAVSYCGNDF NEDDWDFVFS NLKRLIQSAV1320
 1321 VVMEETSENV NDFISGVSSM EKEKENDTLE GLGHIVFISD PSINSAQNAL SAFSLLNALV1380
 1381 NHKSVEGEDN LKSLADETWD PVKDRILEGV LRLFFCTGLT EAIAASYSPE AASIVASFRV1440
 1441 DHLQFWELVA HLVVDSSPRA RDRAVRAVEF WGLSRGSISS LYAIMFSSNP IPSLQLAAYT1500
 1501 VLSTEPISRL AIVADLNAPL NDESLNDQDS SNAGLPSEDK LLLRDEVSCM VEKLDHELLD1560
 1561 TDLTAPERVQ TFLAWSLLLS NVNSLPSLTQ GRERLVQYIE KTANPLILDS LFQHIPLELY1620
 1621 MGQSLKKKDG DIPSELSVVA SAATRAIITG SSLSTVESLW PIETGKMASL AGAIYGLMLR1680
 1681 VLPAYVREWF SEMRDRSASS LIEAFTRTWC SPSLIKNELS QIKKADFNDE SFSVSISKAA1740
 1741 NEVVATYTKD ETGMDLVIRL PVSYPLKPVD VNCAKSIGIS EAKQRKWLMS MQMFVRHQNG1800
 1801 ALAEAIRIWK RNSDKEFEGV EDCPICYSVI HIGNHSLPRR ACVTCKYKFH KACLDKWFYT1860
 1861 SNKKLCPLCQ SPC

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