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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP7_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANDYVSTVL LLLSLLIFLS QRTDSASIVK SLPGFDGPLP FELETGYIGV GEEEEVQLFY  60
   61 YFIKSERNPQ EDPLLLWLSG GPGCSSISGL LYENGPVNVK IEVYNGTLPS LVSTTYSWTK 120
  121 VSSIIYLDQP VGTGFSYSRT KLVNKPSDSG EAKRIHEFLH KWLGKHQEFS SNPFYVGGDS 180
  181 YCGMVIPALV QEISKGNYVC CKPPINLQGY ILGNPSTENE VDINYRIPYA HGMALISDEL 240
  241 YESMKRICKG KYENVDPRNT KCLKLVGEYQ KCTKRINKAL IITPECVDTS PDCYMYRYLL 300
  301 TTYWANDENV QRALHVNKGS IGEWVRCYFE IPYNHDIKSS VPYHMNNSID GYASLIFSGD 360
  361 HDMEVPYLGT QAWIRSLNYS LIDDWRPWMI GDQIAGYTRT YANKMAFATI KGGGHTPEYK 420
  421 PEESYIMFQR WISGQPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle