YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GSOX5_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPARTRVNS LNVAVIGAGA AGLVAARELR RENHTVVVFE RDSKVGGLWV YTPNSEPDPL  60
   61 SLDPNRTIVH SSVYDSLRTN LPRECMGYRD FPFVPRPEDD ESRDSRRYPS HREVLAYLED 120
  121 FAREFKLVEM VRFKTEVVLV EPEDKKWRVQ SKNSDGISKD EIFDAVVVCN GHYTEPRVAH 180
  181 VPGIDSWPGK QIHSHNYRVP DQFKDQVVVV IGNFASGADI SRDITGVAKE VHIASRSNPS 240
  241 KTYSKLPGSN NLWLHSMIES VHEDGTIVFQ NGKVVQADTI VHCTGYKYHF PFLNTNGYIT 300
  301 VEDNCVGPLY EHVFPPALAP GLSFIGLPWM TLQFFMFELQ SKWVAAALSG RVTLPSEEKM 360
  361 MEDVTAYYAK REAFGQPKRY THRLGGGQVD YLNWIAEQIG APPGEQWRYQ EINGGYYRLA 420
  421 TQSDTFRDKW DDDHLIVEAY EDFLRQKLIS SLPSQLLES

Type	Start	End	Confidence
Signal Peptide	1	26	0.89
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	459	0.93