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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CCX3_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAVSFLYSS KTPKFRGVFN GICALVLFCF FFDRSELLRN PLLRNASFVN GGSGSTSGGI  60
   61 TQFMVIRRNA RQIETNGSGN NSSLSSSSTV LCSGLHKHMG YADQCEFLKA NPICSPDGFF 120
  121 DYLSFFYCSC RDFSILGYMM LGVWLVALFY LLGNTAADYF CCSLEKLSKL LRLPPTVAGV 180
  181 TLLPLGNGAP DVFASIAAFV GTDKGEVGLN SVLGGAVFVT SVVVGIVSLC VADKEVKIDK 240
  241 NCFIRDLSFF LFSLVSLLVI LMVGRVTVRI AIAFVSIYVV YAFLVAANVI LRKHAKRFKL 300
  301 EALTPLLPMQ GSVFSPSVGE DMPMNTPLIE TETEDGPPRL QSLPQWMWAS NVAIYSNHFA 360
  361 KVSVHDEDRP PWGWIDDTAE VESSSCTKFT SLLEIPLTIP RRLTIPSVEE DTWSKTYAVA 420
  421 SVSLAPVLLA SLWSSQDDVS LQACGVAYFF SVVIGSTLGF LAYKNTEPDH PPRRFLIPWV 480
  481 LGGFIMSIVW FYMIANELVA LLVTFGEIYG INPSILALTV LAWGNSMGDL VSNIALTMNG 540
  541 GDGVQIALSG CYAGPMFNTL VGLGMSMLFG AWSKSPDTYM LPEDKSLFYT LGFLVLGLVW 600
  601 AMVILPRNDM QPSRTLGVGL IAIYLIFVTF RLSCAMGFIP WAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle