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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRSP_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGITFFTPF LSFLYLLCIL FMTETEAGSR NGDGVYIVYM GSASSAANAN RAQILINTMF  60
   61 KRRANDLLHT YKHGFSGFAA RLTAEEAKVI AKKPGVVSVF PDPHFQLHTT HSWDFLKYQT 120
  121 SVKVDSGPPS SASDGSYDSI VGILDTGIWP ESESFNDKDM GPIPSRWKGT CMEAKDFKSS 180
  181 NCNRKIIGAR YYKNPDDDSE YYTTRDVIGH GSHVSSTIAG SAVENASYYG VASGTAKGGS 240
  241 QNARIAMYKV CNPGGCTGSS ILAAFDDAIA DGVDVLSLSL GAPAYARIDL NTDPIAIGAF 300
  301 HAVEQGILVI CSAGNDGPDG GTVTNTAPWI MTVAANTIDR DFESDVVLGG NKVIKGEGIH 360
  361 FSNVSKSPVY PLIHGKSAKS ADASEGSARA CDSDSLDQEK VKGKIVLCEN VGGSYYASSA 420
  421 RDEVKSKGGT GCVFVDDRTR AVASAYGSFP TTVIDSKEAA EIFSYLNSTK DPVATILPTA 480
  481 TVEKFTPAPA VAYFSSRGPS SLTRSILKPD ITAPGVSILA AWTGNDSSIS LEGKPASQYN 540
  541 VISGTSMAAP HVSAVASLIK SQHPTWGPSA IRSAIMTTAT QTNNDKGLIT TETGATATPY 600
  601 DSGAGELSST ASMQPGLVYE TTETDYLNFL CYYGYNVTTI KAMSKAFPEN FTCPADSNLD 660
  661 LISTINYPSI GISGFKGNGS KTVTRTVTNV GEDGEAVYTV SVETPPGFNI QVTPEKLQFT 720
  721 KDGEKLTYQV IVSATASLKQ DVFGALTWSN AKYKVRSPIV ISSESSRTN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle