YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LECT3_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIQILCFTT LFLAIFTSQV TTAYKFKFDY FGNGTDPISF HGDAEYGPDT DGKSRSGAIA  60
   61 LTRDNIPFSH GRAIFTTPIT FKPNASALYP FKTSFTFSIT PKTNPNQGHG LAFIVVPSNQ 120
  121 NDAGSGLGYL SLLNRTNNGN PNNHLFAVEF DVFQDKSLGD MNDNHVGIDI NSVDSVVSVK 180
  181 SGYWVMTRSG WLFKDLKLSS GDRYKAWIEY NNNYKVVSVT IGLAHLKKPN RPLIEAKFDL 240
  241 SKVIHEVMYT GFAGSMGRGV ERHEIWDWTF QN

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	272	0.99