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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK39_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.84
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKYSVLMIF IASSLLIVLQ NVEIVNAVGC TGSFFNGNSS YAQNRRDLFS TLPNKVVTNG  60
   61 GFYNSSLGKS PNIVHAVALC GRGYEQQACI RCVDSAIQGI LTTTSCLNRV DSFTWDKDEE 120
  121 DNVSCLVSTS NHSTFGNLEL RPSVRYQSPN SIEPSKNMTL FEQEWNAMAN RTVESATEAE 180
  181 TSSVLKYYSA EKAEFTEFPN VYMLMQCTPD ITSQDCKTCL GECVTLFKEQ VWGRQGGEVY 240
  241 RPSCFFRWDL YAFHGAFDNV TRVPAPPRPQ AQGNESSITK KKGRSIGYGG IIAIVVVLTF 300
  301 INILVFIGYI KVYGRRKESY NKINVGSAEY SDSDGQFMLR FDLGMVLAAT DEFSSENTLG 360
  361 QGGFGTVYKG TLLNGQEVAV KRLTKGSGQG DIEFKNEVSL LTRLQHRNLV KLLGFCNEGD 420
  421 EQILVYEFVP NSSLDHFIFD DEKRSLLTWE MRYRIIEGIA RGLLYLHEDS QLKIIHRDLK 480
  481 ASNILLDAEM NPKVADFGTA RLFDSDETRA ETKRIAGTRG YMAPEYLNHG QISAKSDVYS 540
  541 FGVMLLEMIS GERNNSFEGE GLAAFAWKRW VEGKPEIIID PFLIEKPRNE IIKLIQIGLL 600
  601 CVQENPTKRP TMSSVIIWLG SETNIIPLPK APAFTGSRSQ SEIGAMSMSD DVFTELSCR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle