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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME17_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMAFRAYIIN FVILCILVAS TVSGYNQKDV KAWCSQTPNP KPCEYFLTHN SNNEPIKSES  60
   61 EFLKISMKLV LDRAILAKTH AFTLGPKCRD TREKAAWEDC IKLYDLTVSK INETMDPNVK 120
  121 CSKLDAQTWL STALTNLDTC RAGFLELGVT DIVLPLMSNN VSNLLCNTLA INKVPFNYTP 180
  181 PEKDGFPSWV KPGDRKLLQS STPKDNAVVA KDGSGNFKTI KEAIDAASGS GRFVIYVKQG 240
  241 VYSENLEIRK KNVMLRGDGI GKTIITGSKS VGGGTTTFNS ATVAAVGDGF IARGITFRNT 300
  301 AGASNEQAVA LRSGSDLSVF YQCSFEAYQD TLYVHSNRQF YRDCDVYGTV DFIFGNAAAV 360
  361 LQNCNIFARR PRSKTNTITA QGRSDPNQNT GIIIHNSRVT AASDLRPVLG STKTYLGRPW 420
  421 RQYSRTVFMK TSLDSLIDPR GWLEWDGNFA LKTLFYAEFQ NTGPGASTSG RVTWPGFRVL 480
  481 GSASEASKFT VGTFLAGGSW IPSSVPFTSG L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle