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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME39_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINNHPIREK PKHIIFNLLS LIFFLIFLST VVSSQSPSYT THKTQRLTET KTIPELIIAD  60
   61 LNLTILKVNL ASSNFSDLQT RLFPNLTHYE RCAFEDCLGL LDDTISDLET AVSDLRSSSL 120
  121 EFNDISMLLT NVMTYQDTCL DGFSTSDNEN NNDMTYELPE NLKEIILDIS NNLSNSLHML 180
  181 QVISRKKPSP KSSEVDVEYP SWLSENDQRL LEAPVQETNY NLSVAIDGTG NFTTINDAVF 240
  241 AAPNMSETRF IIYIKGGEYF ENVELPKKKT MIMFIGDGIG KTVIKANRSR IDGWSTFQTP 300
  301 TVGVKGKGYI AKDISFVNSA GPAKAQAVAF RSGSDHSAFY RCEFDGYQDT LYVHSAKQFY 360
  361 RECDIYGTID FIFGNAAVVF QNSSLYARKP NPGHKIAFTA QSRNQSDQPT GISILNCRIL 420
  421 AAPDLIPVKE NFKAYLGRPW RKYSRTVIIK SFIDDLIHPA GWLEGKKDFA LETLYYGEYM 480
  481 NEGPGANMAK RVTWPGFRRI ENQTEATQFT VGPFIDGSTW LNSTGIPFSL GF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle