YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP3_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASNYVFSVL RSLLLLIHTV FLGQHHVSSA TIIKSLPGFE GPLPFELETG YIGVGEEEEV  60
   61 QLFYYFIKSE RNPKEDPLLL WLSGGPGCSS ISGLLFENGP LAMKLDVYNG TLPSLVSTTY 120
  121 SWTKASSMIF LDQPVGAGFS YSRTQLLNKP SDSGEAKRIH EFLQKWLGKH QEFSSNPFYV 180
  181 GGDSYSGMVV PATVQEISKG NYECCNPPIN LQGYVLGNPL TDFVYDYNSR IPFAHGMALI 240
  241 SDELFESLKK TCKGDYRNVH PRNTECLKFI EEFNKCTNSI CQRRIIDPFC ETETPNCYIY 300
  301 RFLLAAYWAN DETVRKALQI KKETIGEWVR CHYGIPYNYD IKSSIPYHMN NSINGYRSLI 360
  361 YSGDHDFEVP FLGTQAWIRS LNYSVIDDWR PWMIKDQIAG YTRTYANKMT FATIRGGGHT 420
  421 IEFKPEEASI MFQRWIKGQP L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle