YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB10G_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELPVKAPIP GGREISYRLE TKNLSYRIGG NTPKFSNLCG LLSEKEEKVI LKDVSCDARS  60
   61 AEITAIAGPS GAGKTTLLEI LAGKVSHGKV SGQVLVNGRP MDGPEYRRVS GFVPQEDALF 120
  121 PFLTVQETLT YSALLRLKTK RKDAAAKVKR LIQELGLEHV ADSRIGQGSR SGISGGERRR 180
  181 VSIGVELVHD PNVILIDEPT SGLDSASALQ VVTLLKDMTI KQGKTIVLTI HQPGFRILEQ 240
  241 IDRIVLLSNG MVVQNGSVYS LHQKIKFSGH QIPRRVNVLE YAIDIAGSLE PIRTQSCREI 300
  301 SCYGHSKTWK SCYISAGGEL HQSDSHSNSV LEEVQILGQR SCKNIFRTKQ LFTTRALQAS 360
  361 IAGLILGSIY LNVGNQKKEA KVLRTGFFAF ILTFLLSSTT EGLPIFLQDR RILMRETSRR 420
  421 AYRVLSYVLA DTLIFIPFLL IISMLFATPV YWLVGLRREL DGFLYFSLVI WIVLLMSNSF 480
  481 VACFSALVPN FIMGTSVISG LMGSFFLFSG YFIAKDRIPV YWEFMHYLSL FKYPFECLMI 540
  541 NEYRGDVFLK QQDLKESQKW SNLGIMASFI VGYRVLGFFI LWYRCYRTRS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle