YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7329658, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSDDTIEES LLVDPKLLFI GSKIGEGAHG KVYQGRYGRQ IVAIKVVNRG SKPDQQSSLE  60
   61 SRFVREVNMM SRVQHHNLVK VSLLLSSLSL LSILLLEYTI SIWQFIGACK DPLMVIVTEL 120
  121 LPGMSLRKYL TSIRPQLLHL PLALSFALDI ARALHCLHAN GIIHRDLKPD NLLLTENHKS 180
  181 VKLADFGLAR EESVTEMMTA ETGTYRWMAP ELYSTVTLRQ GEKKHYNNKV DVYSFGIVLW 240
  241 ELLTNRMPFE GMSNLQAAYA AAFKERPVMP EGISPSLAFI VQSCWVEDPN MRPSFSQIIR 300
  301 LLNEFLLTLT PPPPQPLPET ATNRTNGRAI TEFSIRPKGK FAFIRQLFAA KRNINS

Type	Start	End	Confidence
Cytoplasmic	1	77	0.81
Transmembrane Helix	78	96	0.77
Non-Cytoplasmic	97	356	0.69