YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GSXL6_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPPPNSISS RNVAVIGAGA AGLVAARELR REGHTVTIFE RQKQVGGLWV CTPNVEPDLL  60
   61 SIDPDRTVVH SSVYQSLRTN LPRECMGYSD FPFVTRPDDE SRDPRRYPDH REVMRYLQDF 120
  121 AKEFKIEEMI RFETEVFRVE PTAENSCKWR VQFRSSSGVS GEDIFDAVVI CNGHFTEPRL 180
  181 AHIPGIESWP GKQIHSHNYR VSDPFKGQVV IVIGYQSSGS DISRDIAILA KEVHIAAKSD 240
  241 AYAKESSIYS NLHFHPTIDR VYEDGSVVFQ DGKLIFADAI VHCTGYKYCF PFLETKGYVN 300
  301 VEDNRVGPLY KHVFPPALAP GLSFIGLPSM ALQFFMFEIQ SRWVASVLSG RVKLPSEEQM 360
  361 MEDVIAFYAK LKSLGIPKRF THFLTDPQWT PMFEKLKPHE AVLISQSEYF NWIAEQCGCS 420
  421 SIERWREEQY NIAIKKDDDN FRDEWDDDDQ IIQEAYRDFA KFKPSKVWST

Type	Start	End	Confidence
Signal Peptide	1	26	0.86
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	470	0.89