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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: KCS12_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLLFLFFSL LLSYLFFKIW KLIDSKQDKD CYILDYQCHK PTDDRMVSTQ FSGEIIYRNQ  60
   61 NLGLTEYKFL LKAIVSSGIG EQTYAPRLVF EGREERPSLQ DGISEMEEFY VDSIGKLLER 120
  121 NQISPKDIDI LVVNVSMLSS TPSLASRIIN HYKMRDDVKV FNLTGMGCSA SLISVDIVKN 180
  181 IFKSYANKLA LVATSESLSP NWYSGNNRSM ILANCLFRSG GCAILLTNKR SLRKKAMFKL 240
  241 KCMVRTHHGA REESYNCCIQ AEDEQGRVGF YLGKNLPKAA TRAFVENLKV ITPKILPVTE 300
  301 LIRFMLKLLI KKIKIRQNPS KGSTNLPPGT PLKAGINFKT GIEHFCIHTG GKAVIDGIGH 360
  361 SLDLNEYDIE PARMTLHRFG NTSASSLWYV LAYMEAKKRL KRGDRVFMIS FGAGFKCNSC 420
  421 VWEVVRDLTG GESKGNVWNH CIDDYPPKSI LNPYLEKFGW IQDEDPDTFK VPDAFM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle