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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9757802, gi|1...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQLKVLPLL FLSWVMFLQS THQLPNSQTQ VLYQLRKHLE FPKALESWGN YYGDLCQIPA  60
   61 TAHMSITCQG NSITELKVMG DKLFKPFGMF DGSSLPNHTL SEAFIIDSFV TTLTRLTSLR 120
  121 VLSLVSLGIY GEFPGKIHRL NSLEYLDLSS NFLFGSVPPD ISRLVMLQSL MLDGNYFNGS 180
  181 VPDTLDSLTN LTVLSLKNNR FKGPFPSSIC RIGRLTNLAL SHNEISGKLP DLSKLSHLHM 240
  241 LDLRENHLDS ELPVMPIRLV TVLLSKNSFS GEIPRRFGGL SQLQHLDLSF NHLTGTPSRF 300
  301 LFSLPNISYL DLASNKLSGK LPLNLTCGGK LGFVDLSNNR LIGTPPRCLA GASGERVVKL 360
  361 GGNCLSIIGS HDQHQEFLCE EAETEGKQFQ GRKVGILIAV IGGAVLVLVF FVLVILLLLC 420
  421 TNRCSSCCSR EKSVPQTRLK VVTDNSHTSL SSEVLASARL ISQTAKLGAQ GVPSCRSFSF 480
  481 EDLKEATDDF DSSRFLGEGS LGKLYRGTLE NGSSIAIRCL VLSRKFSSQS IRGHLDWMAK 540
  541 LNHPHLLGFL GHCTQTSGEH DPVATILYLV YEYMPNGSYR THLSESFSEK ILTWPDRLAI 600
  601 LIEIAKAVHF LHTGVMPGSF NNQLKTNNIL LDEHKIAKLS DYGVSAIIEE NEKLEDSTLL 660
  661 LLLHFADKVR NPQVKVCIFC PCIAKLHGIY ENLIQTLRLC RKKAKREDDV YNFGFILLES 720
  721 LIGPVPTTKG EAFLLNEMTS FGSQDGRQKI VSPTVLTTSS QESLSIAISI ANKCVLLEPS 780
  781 ARPSFEDVLW NLQYAAQMQS AADAERKSDT SS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle