YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SR45_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKPSRGRRS PSVSGSSSRS SSRSRSGSSP SRSISRSRSR SRSLSSSSSP SRSVSSGSRS  60
   61 PPRRGKSPAG PARRGRSPPP PPSKGASSPS KKAVQESLVL HVDSLSRNVN EAHLKEIFGN 120
  121 FGEVIHVEIA MDRAVNLPRG HGYVEFKARA DAEKAQLYMD GAQIDGKVVK ATFTLPPRQK 180
  181 VSSPPKPVSA APKRDAPKSD NAAADAEKDG GPRRPRETSP QRKTGLSPRR RSPLPRRGLS 240
  241 PRRRSPDSPH RRRPGSPIRR RGDTPPRRRP ASPSRGRSPS SPPPRRYRSP PRGSPRRIRG 300
  301 SPVRRRSPLP LRRRSPPPRR LRSPPRRSPI RRRSRSPIRR PGRSRSSSIS PRKGRGPAGR 360
  361 RGRSSSYSSS PSPRRIPRKI SRSRSPKRPL RGKRSSSNSS SSSSPPPPPP PRKT

Type	Start	End	Confidence
Signal Peptide	1	56	0.96
N-region	1	47
H-region	48	53
C-region	54	56
Cleavage Site	56	57
Non-Cytoplasmic	57	414	0.99