YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PAP6_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSSTFSSL LPSPPALLSD HRSPPPSIRY SFSPLTTPKS SRLGFTVPEK RNLAANSSLV  60
   61 EVSIGGESDP PPSSSGSGGD DKQIALLKLK LLSVVSGLNR GLVASVDDLE RAEVAAKELE 120
  121 TAGGPVDLTD DLDKLQGKWR LLYSSAFSSR SLGGSRPGLP TGRLIPVTLG QVFQRIDVFS 180
  181 KDFDNIAEVE LGAPWPFPPL EATATLAHKF ELLGTCKIKI TFEKTTVKTS GNLSQIPPFD 240
  241 IPRLPDSFRP SSNPGTGDFE VTYVDDTMRI TRGDRGELRV FVIA

Type	Start	End	Confidence
Signal Peptide	1	19	0.91
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	284	0.99