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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25518065, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSFVGFVVF LSGFFLGILA VLSAEAAGFM YLLKRLNRKR DRIESKPVSD PSIKDFNPRE  60
   61 SIDFCINKQG VVWILELDEG LKNWMKEKLP KEQKRKRGLL EIHPLRKFAR IKDHKLILSD 120
  121 ADSTQSETTV SLIGCSIEAV SGSDLPTRKW AKRFPIKVES KISPALYKGN QVFYIYLETS 180
  181 WEKESWCKAL RLASCENQER FIWYSTKLKE DFRNYVTSLN VAYPSFMKPS LGFSFETLDK 240
  241 GNRTDGSSSK VRLFLKKFSR KRSNREDRKT YSHHGSSSGK CFPGKNNMTD DTDVPIFSRS 300
  301 VSHSSHISGV SHLSGVSDGD SEEKVDMDEG TLALNLLISR LFFDLKRKTG VKNSVQARIQ 360
  361 RLLSNMRTPS YIGELICSDV DTGNLPPHIH ATRVLPMEMS GVWAFELDIE YSGDVVIDVE 420
  421 TRVDIREVDL QQGITDTRLQ PRSSGVVPSN FAEGVEDFEK QLVFPVETVN AGEVKNDESK 480
  481 SSRGTKAAPN GVSRWKSILK TIAEQVSQVP ISLSIRVSSL RGTLRVHMKP PPSDQLWFGF 540
  541 TSMPDIEFDL ASSVGEHKIT NSHVAMFLIN RFKTAIREAV VLPNCESLTI PWMIAEKDDW 600
  601 VQRKAAPFMW LNQENDHNTS HATEARSKSD KPPTSFSCLQ AEQMQRTANA TQKIISEIGT 660
  661 LASSSCAQSE QVQKAATAFQ KQNTEAEAIM STPLSNSTTV TIENDKSLEE LKTPLLVPSS 720
  721 SNKQETNSRG SSREVSAVQS PSRSVASSEE DDSRGKKQGR RARMLDLGKK MGEKLEEKRR 780
  781 HMEEKSRQIV EKMRGPS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle