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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: THAD_ARATH
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.31
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASMITVDFE NCFIFLLLCL FSRLSYDLFF RKTKDSRAGC ALPPSPPSLP IIGHLHLILF  60
   61 VPIHQSFKNI SSKYGPLLHL RFFNFPIVLV SSASTAYEIF KAQDVNVSSR PPPPIEESLI 120
  121 LGSSSFINTP YGDYSKFMKK FMVQKLLGPQ ALQRSRNIRA DELERFYKTL LDKAMKKQTV 180
  181 EIRNEAMKLT NNTICKMIMG RSCSEENGEA ETVRGLVTES IFLTKKHFLG AMFHKPLKKL 240
  241 GISLFAKELM NVSNRFDELL EKILVEHEEK LQEHHQTSDM LDMLLEAYGD ENAEYKITRD 300
  301 QIKSLFVDLF SAGTEASANT IQWTMAEIIK NPKICERLRE EIDSVVGKTR LVQETDLPNL 360
  361 PYLQAIVKEG LRLHPPGPVV RTFKETCEIK GFYIPEKTRL FVNVYAIMRD PDFWEDPEEF 420
  421 KPERFLASSR LGEEDEKRED MLKYIPFGSG RRACPGSHLA YTVVGSVIGM MVQHFDWIIK 480
  481 GEKINMKEGG TMTLTMAHPL KCTPVPRNLN T

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle