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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25406862, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.28
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYEITEQKK VGLGLIGFGL SFTFLGVILY FDRGDYLFRP WTLSNICTLA HYRHYLGDIR  60
   61 CHCPIRRILV NSKGISFPDS FCRMDNTVSS HELPVRALFL NNIPCSCLNL FSPLWFLSNL 120
  121 IRQRSSSADF SRRDVSSCFL ARRGIDLNPL NNLRRRSRTH SALRGERTKN QTIMWISRLK 180
  181 RVRRTIMVLG VANFVVIVSG CVLTLVSDAD CDSPGQLFPL FAVCFAAGVK LAAMVKVGTT 240
  241 QELMAMTIMD SPTQNNHQRK LKYKTWLWWT RFAMVITVLQ FIGATYLLFR LAKYVSRDGL 300
  301 PRNCVLGLSP DTGGWKQTLQ VTFLITVCFV ALAQCFTGSD ILQWRSFYAT QDDAWKAHYQ 360
  361 EVFDHGIREV LGVIEEDEVC SVARLLGDLV SYRASGTGHL EFLAGLALLQ SNSQFPESYE 420
  421 DCMEAPAFHL QEAAMLHKFA EAAYTGPLLD VGRNPALFLC TWICRQGILT PWSRKWRPKL 480
  481 DGDNWWRGHA AAFLKFINFP AHVLRRGRIC REKCKATYFV VVLHYLRCVV IAVRGTETAE 540
  541 DLITDGLGRA CSLTVEDLDG LTNSVSLELK TSISDVSSHA CFLFLLIYVE VSLHTTPPVS 600
  601 SNDSPFCCFM CFSVSHVHGM DTSRKHYGHS GIVEAARDLF MQIEGDPKSG ESESSGFLSS 660
  661 LIGDGCECDG YSIRIVGHSL GGAIASLLGI RLRCRFPNLY VYAYGPLPCV DSDVAEACSE 720
  721 FVTSIVLDNE FSSRLSYGSI RRLQVAAIKV LSQDPKADTA LIFRLARRFL SASKRQRENV 780
  781 EEKTSEEAID VNNSPESQHD QIYPIWEEAE AEMQQDSEEF INPFHGMASE DNPVSQFMET 840
  841 GPTKEDDDEA PEMFMPGLVI HIVPEGNNMS VPIWRGWPIC DVTDGYKAYV ANRESFKEIM 900
  901 VSPSMFLDHL PWRCRHALQK VLESRNLFFD LTSETDIQVI ALFRIKLKNP HCSFLEEKTR 960
  961 LSIFKSKENM NKPRTKFGCK HLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle