YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATL59_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFIDPRTYI PSNSTESQIL KFTFIVCVPI CVILIVLLVL YIMRRNSNTN VDWSSLGGFV  60
   61 PTNNNLSTAE LGLSKDIREM LPIVIYKESF TVNDTQCSVC LGDYQAEEKL QQMPSCGHTF 120
  121 HMECIDLWLT SHTTCPLCRL SLIPKPSVDL SHQSIEIVSS IENTNGGEAS TQPDSQSATE 180
  181 AIIHIDDVEE GNRDSIEVVK ESEENDRNSV GTSDGCCSCR LGEKA

Type	Start	End	Confidence
Cytoplasmic	1	19	0.69
Transmembrane Helix	20	43	0.92
Non-Cytoplasmic	44	225	0.70