YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15238018, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLNIGGTIT KLGWVLSLLE HVVSCPPYKH KIRFSLLLLF GVLHGASVGP CIKSTIDIDS  60
   61 SILITAFLGT AVIFFCFSAV AMLARRREYI YLGGLLSSGF SLLTWLKNSD QFASATVEIQ 120
  121 MYLGLLLFVG CIVVNTQEII EKAHCGDMDY AVHSLILYIG FVRVFLQILS IMWNTSADRI 180
  181 RRNNEET

Type	Start	End	Confidence
Cytoplasmic	1	33	0.86
Transmembrane Helix	34	56	0.83
Non-Cytoplasmic	57	61	0.76
Transmembrane Helix	62	82	0.95
Cytoplasmic	83	88	0.78
Transmembrane Helix	89	106	0.89
Non-Cytoplasmic	107	118	0.64
Transmembrane Helix	119	136	0.78
Cytoplasmic	137	149	0.58
Transmembrane Helix	150	173	0.79
Non-Cytoplasmic	174	187	0.61