YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15239201, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENLEDLKIL AEQWSHQGIE YLQKIPPNQL YAAIGVLLFT TILLFLSIRL VRRTKSNTVL  60
   61 LSGLTGSGKT VLFYQLRDGS SHQGTVTSME PNEGTFVLHS ENTKKGKIKP VHLVDVPGHS 120
  121 RLRPKLEEFL PQAAAIVFVV DALEFLPNCR AASEYLYEIL TNANVVKKKI PVLLCCNKTD 180
  181 KLTAHTKEFI RKQMEKEIEK LRASRSAVST ADIANDFTIG IEGEVFSFTH CSNKVTVAEA 240
  241 SGLTGETIQI EDFIREYIKP

Type	Start	End	Confidence
Non-Cytoplasmic	1	29	0.71
Transmembrane Helix	30	51	0.88
Cytoplasmic	52	260	0.58