YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6721154, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSRKKTKKN VYCNQPIMSI ISIKGNSRQE HKSKKIRNNT KMKTFQLMMI SFLFVAITTT  60
   61 SGVVSEGNDV VYDGEGDPVK PNVPYYISFM TSDYNMWICR MQYGSTDPNS CPQQPLMVTH 120
  121 PNLAAPTPVM FVLANKSDVV RESAKLKIKF VGPRQCGKSG FWKVVQRNSS EGEVFLNGSK 180
  181 SMSHNDSTFA IHKTNEYYKF TFGDGDYPTT ISMTNDYPIY RLLSKRLSGE MEIYFYKNLT 240
  241 TSEG

Type	Start	End	Confidence
Signal Peptide	1	62	0.41
N-region	1	53
H-region	54	59
C-region	60	62
Cleavage Site	62	63
Non-Cytoplasmic	63	244	0.92