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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CESAA_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAGSYRRYE FVRNRDDSDD GLKPLKDLNG QICQICGDDV GLTKTGNVFV ACNECGFPLC  60
   61 QSCYEYERKD GSQCCPQCKA RFRRHNGSPR VEVDEKEDDV NDIENEFDYT QGNNKARLPH 120
  121 RAEEFSSSSR HEESLPVSLL THGHPVSGEI PTPDRNATLS PCIDPQLPGI YQLLLLPVRI 180
  181 LDPSKDLNSY GLVNVDWKKR IQGWKLKQDK NMIHMTGKYH EGKGGEFEGT GSNGDELQMV 240
  241 DDARLPMSRV VHFPSARMTP YRIVIVLRLI ILGVFLHYRT THPVKDAYAL WLTSVICEIW 300
  301 FAFSWLLDQF PKWYPINRET FLDRLALRYD RDGEPSQLAP VDVFVSTVDP MKEPPLVTAN 360
  361 TVLSILAVDY PVDKVACYVS DDGSAMLTFE ALSETAEFSK KWVPFCKKFN IEPRAPEFYF 420
  421 SQKIDYLKDK IQPSFVKERR AMKREYEEFK VRINILVAKA QKIPEDGWTM EDGTSWPGNN 480
  481 PRDHPGMIQV FLGHSGGLDT DGNELPRLIY VSREKRPGFQ HHKKAGAMNA LIRVSAVLTN 540
  541 GAYLLNVDCD HYFNNSKAIK EAMCFMMDPA IGKKCCYVQF PQRFDGIDLH DRYANRNTVF 600
  601 FDINLKGLDG IQGPVYVGTG CCFNRQALYG YDPVLTEEDL EPNIIVKSCF GSRKKGKSRK 660
  661 IPNYEDNRSI KRSDSNVPLF NMEDIDEDVE GYEDEMSLLV SQKRLEKRFG QSPVFIAATF 720
  721 MEQGGLPSTT NPLTLLKEAI HVISCGYEAK TDWGKEIGWI YGSVTEDILT GFKMHARGWI 780
  781 SIYCVPSRPA FKGSAPINLS DRLNQVLRWA LGSIEILLSR HCPIWYGYNG RLKLLERIAY 840
  841 INTIVYPITS IPLLAYCMLP AFCLITNTFI IPEISNLASL CFMLLFASIY ASAILELKWS 900
  901 DVALEDWWRN EQFWVIGGTS AHLFAVFQGL LKVFAGIDTN FTVTSKASDE DGDFAELYVF 960
  961 KWTSLLIPPT TILLVNLVGI VAGVSYAINS GYQSWGPLMG KLLFAFWVVA HLYPFLKGLL1020
 1021 GRQNRTPTIV IVWSALLASI FSLLWVRINP FVSTTGVMSN SFMGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle