YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GT14C_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSHISSPR SYSRPAISIF GVFLLFLLVL TLSSRKPSDS SSGLAPNRNL ATKSTIPRFA  60
   61 YLVTGTKGDG KRVKRLLKAI HHPRNYYLLH LDLEASDEER MELAKYVRSE KKKFENVMVM 120
  121 GLADLVTEKG PTMLASTLHG VAILLKKAKD WDWFINLSAS DYPLMPQDDI LHIFSYLPRY 180
  181 LNFIEHTSNI GWKENQRARP IIIDPGFYHL KKSGVFWAKE RRSLPASFKL FMGSTSVALT 240
  241 RPFLEFCIWG WDNLPRTLLM YYTNFLLSSE GYFQTVVCNN KDYQNTTVNH DLHYTKWDPL 300
  301 QQRTLNVTVE NFRDMVQSGA PFAREFREDD LVLDKIDIEL LGQTDTGLEL KTPDVVKPTV 360
  361 SWKRLEKLMV RLLDHENFRA KQCK

Type	Start	End	Confidence
Signal Peptide	1	33	0.85
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	384	0.99