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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FH11_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.26
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYFRQIFLM IIVVSLHCCK VRFFCIVANA KELDDWKVLT VENGERYRTH VGRYAGEEGG  60
   61 EKIKLRVLEK FRALLDLIKP STSRRRNLAE SASFSPWPAP SPSPFPNGGP IESPAYPPAP 120
  121 PRPIPPHLRR PLPQRTHPLE QPEIQRRKHE KGGTFKKILV PVVASTASAI GFVVCVVGVF 180
  181 CLCARRKRKM NGKTLSFKRK KGKSQSSTRK VSVNPTLDFL YLNSLGVDLE RQNSVSVKEI 240
  241 RETEKDLNGI NGGLLEEEVK RSIETEISHD WDNASSYSTK EIVSVHENDE EQTVNSVSVP 300
  301 VVVINDSSDD DESFHSVGGG SQYSNPRLSN ASSASGSVNV GSSQRFSEHK LDIPECSRSD 360
  361 FGISVSAPPP PPPPPPPLPQ FSNKRIHTLS SPETANLQTL SSQLCEKLCA SSSKTSFPIN 420
  421 VPNSQPRPPP PPPPPQQLQV AGINKTPPPP LSLDFSERRP LGKDGAPLPK LKPLHWDKVR 480
  481 ATPDRTMVWD KLRTSSFELD EEMIESLFGY TMQSSTKNEE GKSKTPSPGK HLLEPKRLQN 540
  541 FTILLKALNA TADQICSALG KGEGLCLQQL EALVKMVPTK EEELKLRSYK GAVDELGSAE 600
  601 KFLRALVGVP FAFQRAEAML YRETFEDEVV HLRNSFSMLE EACKELKSSR LFLKLLEAVL 660
  661 KTGNRMNVGT IRGGAKAFKL DALLKLSDVK GTDGKTTLLH FVVQEISRSE GIRVSDSIMG 720
  721 RIMNQRSNKN RTPEEKEEDY RRMGLDLVSG LNTELRNVKK TATIDLEGLV TSVSNLRDGL 780
  781 GQLSCLASEK LKGDEENRAF VSSMSSFLRY GEKSLEELRE DEKRIMERVG EIAEYFHGDV 840
  841 RGDEKNPLRI FVIVRDFLGM LDHVCRELRC VRVPNSPSPL APFR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle