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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10177664
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLAKFLCWI VLLLGISLVE SRYMVYNTSH TIVPGKLNVH VVPHSHDDVG WLKTVDQYYV  60
   61 GSNNSIQVAC VQNVLDSIVP ALLADKNRKF IYVEQAFFQR WWNEQSEEIK RIVKELIHSG 120
  121 QLELINGGMC MHDEAAPHYI DMIDQTTLGH RFIIREFNVT PRIGWQIDPF GHSAVQAYLL 180
  181 GAEVGFDSVF FGRIDYQDRE KRYKEKTLEV IWRGSKSLGS SSQIFAGAFP TNYEPPPGGF 240
  241 YYEITDDSPV VQDDPDLFDY NVQERVNAFV AAALDQANIT RINHIMFTMG TDFRYQYAHT 300
  301 WYRQMDKLIH YVNLDGRVNA FYSTPSIYTD AKHAANEAWP LKTEDYFPYA DRINAYWTGY 360
  361 FTSRPALKRY VRVMSAYYLA ARQLEFFKGR SQKGPNTDSL ADALAIAQHH DAVSGTSKQH 420
  421 VANDYAKRLA IGYVEAESVV ATSLAHLTKV DPTLNPTFQQ FGLPFQCLLL NISYCPSSEV 480
  481 NLSDGKSLIV LAYNPLGWKR VDIVRLPVVG GDVSVHDSEG HEVESQLVPF TDEYVALRKY 540
  541 HVEAYLGQSP TQVPKYWLVF SVTVPPLGFT TYTISTAKKT DGYSSKSYVS NILKGEQSII 600
  601 NIGHGHLKLS FSTDQGTAIN YVNGRTSMTE PVKQTFSYYS AYNGSNDKEP LIPQNSGAYV 660
  661 FRPNGTFPIN PEGQVPLTVI HGPLVDEVHQ QINPWISQIT RVYKGKEHVE VEFIVGNIPI 720
  721 DDGIGKEVVT QISSSLKSNK TFYTDSSGRD YIKRIRDYRS DWKLDVNQPI AGNYYPINHG 780
  781 IYLQDSKKEF SVMVDRAFGG SSIVDGQVEL MLHRRLLLDD SRGVAENLNE TVCVQDKCTG 840
  841 LTIQGKYYYR IDPYGEGAKW RRTFGQEIYS PLLLAFAQQD DGKPMSFGAA SFSGIDPSYS 900
  901 LPDNVALLTL QELDDGNVLL RLAHLYEVEE DKELSGVASV ELKKLFPGKK IGKLTEMSLS 960
  961 ANQERSTMEK KRLVWKVEGE GSYGEEKKAK RGREIDPRKL EMELYPMEIR TVLIHLELPS1020
 1021 SHSRINRFDA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle