YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	XERIC_ARATH
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSSLPGPS EGMLCVILVN TALSISIVKG IVRSFLGIVG ISLSPSSSSP SSVTVSSENS  60
   61 STSESFDFRV CQPESYLEEF RNRTPTLRFE SLCRCKKQAD NECSVCLSKF QGDSEINKLK 120
  121 CGHLFHKTCL EKWIDYWNIT CPLCRTPLVV VPEDHQLSSN VW

Type	Start	End	Confidence
Cytoplasmic	1	11	0.39
Transmembrane Helix	12	32	0.53
Non-Cytoplasmic	33	162	0.73