YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ADT5_ARATH
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCISKEDEED PSRNRRNQSP LSLPQTLKHF QKDLLAGAVM GGVVHTIVAP IERAKLLLQT  60
   61 QESNIAIVGD EGHAGKRRFK GMFDFIFRTV REEGVLSLWR GNGSSVLRYY PSVALNFSLK 120
  121 DLYRSILRNS SSQENHIFSG ALANFMAGSA AGCTALIVVY PLDIAHTRLA ADIGKPEARQ 180
  181 FRGIHHFLST IHKKDGVRGI YRGLPASLHG VIIHRGLYFG GFDTVKEIFS EDTKPELALW 240
  241 KRWGLAQAVT TSAGLASYPL DTVRRRIMMQ SGMEHPMYRS TLDCWKKIYR SEGLASFYRG 300
  301 ALSNMFRSTG SAAILVFYDE VKRFLNWGGI

Type	Start	End	Confidence
Non-Cytoplasmic	1	136	0.66
Transmembrane Helix	137	160	0.67
Cytoplasmic	161	330	0.45