YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	OLEO5_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVRTHSHQ LQVHPQRQHE GGIKVLYPQS GPSSTQVLAV FVGVPIGGTL LTIAGLTLAG  60
   61 SVIGLMLAFP LFLIFSPVIV PAAFVIGLAM TGFLASGAIG LTGLSSMSWV LNYIRRAGQH 120
  121 IPEELEEAKH RLADMAEYVG QRTKDAGQTI EDKAHDVREA KTFDVRDRDT TKGTHNVRDT 180
  181 KTT

Type	Start	End	Confidence
Cytoplasmic	1	37	0.49
Transmembrane Helix	38	72	0.75
Non-Cytoplasmic	73	77	0.31
Transmembrane Helix	78	111	0.77
Cytoplasmic	112	183	0.90