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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12324674, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGASRRSAR GRIKSSSLSP GSDEGSAYPP SIRRGKGKEL VSIGAFKTNL KILVGLIILG  60
   61 IIVIYFVINR LVRHGLLFDE SQKPRVITPF PAPKVMDLSM FQGEHKESLY WGTYRPHVYF 120
  121 GVRARTPLSL VAGLMWLGVK DEMYVMRHFC ENSDDLSTFG WREHNGRDYG RQELVENDMV 180
  181 IETSFVKSKG DGLGYGGDWA VRIDVKNKGL NDDVKRSAHL FFYLADEGGN VLNLGQDGLD 240
  241 FQGSSLLVSG SREDVGDWQI HLKSQNQLET HYSGFKTPHI YNLSDLVQQN LALQARKFGR 300
  301 LQLSDTSEDS SNIYIFQVIS LNKDISGRLP FTIDIPFISG IKGESSNVEK RLTSLTGLPL 360
  361 SDLLKKKHQE FDAKFNECFK LSEKHDSETL GVGRTAIANM LGGIGYFYGQ SKIYVPKSTQ 420
  421 PGSRDNFLLY WPAELYTAVP SRPFFPRGFL WDEGFHQLLI WRWDIRITLD IVGHWLDLLN 480
  481 IDGWIPREQI LGAEALSKVP EEFVVQYPSN GNPPTLFLVI RDLIDAIRME KFVASEKDEV 540
  541 LSFLERASVR LDAWFQWFNT SQKGKEIGSY FWHGRDNTTT QELNPKTLSS GLDDYPRASH 600
  601 PSEDERHVDL RCWMYLAADC MHSITELLGK EDKLSKVSTR WKRKGCQQFS HFNFINFLFL 660
  661 LTILYSHSWI ISEQMHYDSD YGAYFDFGNH TEKVKLIWKE VIQENGQLSR QLVRKTFGKP 720
  721 KLKLVPHLGY VSFFPFMSRI IPPDSPILEK QLDLISNRSI LWSDYGLVSL AKTSSMYMKR 780
  781 NTEHDAPYWR GPIWMNMNYM ILSSLYHYSI VDGPYREKSK AIYTELRSNL IRNVVRNYYE 840
  841 TGYIWEQYDQ VKGTGKGTRL FTGWSALTLL IMSEDYPIF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle