YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6056400, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKVTRRTIS SFIFFIVSST ILFLAGKSSA KISHNGDNNV TALFLFGDSF LDAGNNNYIN  60
   61 TTTLDQANFP PYGQTFFGLP TGRFSDGRLI SDFIAEYANL PLIPPFLEPG NSQKKLYGVN 120
  121 FASAGAGALV ETFQGSVINL RTQLDHYKKV ERLWRTNFGK EESKKRISRA VYLISIGSND 180
  181 YSSIFLTNQS LPISMSQHVD IVIGNLTTFI HEIYKIGGRK FGFLNVPDLG CFPALRILQP 240
  241 KNDDSCLRDA SRLASMHNRA LTNLLFQMQR QVKGFKFSLF DMNKSLRLRM QHPSKFGFKE 300
  301 GEEACCGTGK WRGVFSCGGK RIVKEYQLCE NPKDYIFWDS LHLTQNTYNQ FANLIWNGGH 360
  361 MSDSLVVGPY NINNLFQIP

Type	Start	End	Confidence
Signal Peptide	1	30	0.90
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	379	0.99